uk.ac.ed.simulator_pdb.model
Class SimObject

java.lang.Object
  uk.ac.ed.simulator_pdb.model.InstanceFileObject
      uk.ac.ed.simulator_pdb.model.SimObject

public class SimObject

extends InstanceFileObject

Nested Class Summary

Nested classes inherited from class uk.ac.ed.simulator_pdb.model.InstanceFileObject

InstanceFileObject.InstanceFileObjectAdapter, InstanceFileObject.InstanceFileObjectEvent, InstanceFileObject.InstanceFileObjectListener

Field Summary

Fields inherited from class uk.ac.ed.simulator_pdb.model.InstanceFileObject

id, instance_listeners, parent

Constructor Summary

SimObject(SimObject object)

SimObject(SimObjectTemplate template, java.lang.String id)

SimObject(SimObjectTemplate template, java.lang.String id, javax.vecmath.Vector3d position, javax.vecmath.Matrix3d orientation)

Method Summary

void	addBond(SimBond bond)
void	addParticle(SimParticle particle)
java.lang.Object	clone()
SimBond[]	getBonds()
SimCluster	getCluster()
javax.vecmath.Matrix4d	getInverseTransformationMatrix()
double	getMass()
SimParticle[]	getParticles()
SimObjectTemplate	getTemplate()
javax.vecmath.Matrix4d	getTransformationMatrix()
void	setCluster(SimCluster cluster)
protected void	setTemplate(SimObjectTemplate template)
void	setTransformationMatrix(javax.vecmath.Matrix4d transformation)

Methods inherited from class uk.ac.ed.simulator_pdb.model.InstanceFileObject

addInstanceListener, fireInstanceFileObjectChangedEvent, getId, getInstanceFile, isIdOk, removeInstanceListener, setId, setInstanceFile, toString

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

SimObject

public SimObject(SimObject object)

SimObject

public SimObject(SimObjectTemplate template,
                 java.lang.String id)

SimObject

public SimObject(SimObjectTemplate template,
                 java.lang.String id,
                 javax.vecmath.Vector3d position,
                 javax.vecmath.Matrix3d orientation)

Method Detail

clone

public java.lang.Object clone()

setCluster

public void setCluster(SimCluster cluster)

getCluster

public SimCluster getCluster()

addParticle

public void addParticle(SimParticle particle)

getParticles

public SimParticle[] getParticles()

getTemplate

public SimObjectTemplate getTemplate()

setTemplate

protected void setTemplate(SimObjectTemplate template)

getTransformationMatrix

public javax.vecmath.Matrix4d getTransformationMatrix()

getInverseTransformationMatrix

public javax.vecmath.Matrix4d getInverseTransformationMatrix()

setTransformationMatrix

public void setTransformationMatrix(javax.vecmath.Matrix4d transformation)

getMass

public double getMass()

addBond

public void addBond(SimBond bond)

getBonds

public SimBond[] getBonds()