Serialized Form

Package us.nj.nwk.overlapping_analysis

Class us.nj.nwk.overlapping_analysis.Java3DView extends JPanel implements Serializable

Serialized Fields

geometry

javax.media.j3d.BranchGroup geometry

population_branch_group

javax.media.j3d.BranchGroup population_branch_group

appearance

javax.media.j3d.Appearance appearance

population_shape

javax.media.j3d.Shape3D population_shape

point_cells_shape

javax.media.j3d.Shape3D point_cells_shape

bound_size

double bound_size

panel

Java3DPanel panel

open_image

Image open_image

hand_image

Image hand_image

zoom_image

Image zoom_image

rotate_image

Image rotate_image

default_cursor

Cursor default_cursor

move_cursor

Cursor move_cursor

zoom_cursor

Cursor zoom_cursor

rotate_cursor

Cursor rotate_cursor

model

Model model

Class us.nj.nwk.overlapping_analysis.Model.ModeChangedEvent extends ChangeEvent implements Serializable

Serialized Fields

mode

int mode

old_mode

int old_mode

Class us.nj.nwk.overlapping_analysis.Model.ModelEvent extends EventObject implements Serializable

Serialized Fields

model

Model model

Class us.nj.nwk.overlapping_analysis.Model.PopulationEvent extends EventObject implements Serializable

Serialized Fields

cell_p

Model.CellPopulation cell_p

population

Model.Population population

addedMorphology

Morphology addedMorphology

removedMorphology

Morphology removedMorphology

Class us.nj.nwk.overlapping_analysis.NetBeansModuleView extends CloneableTopComponent implements Serializable

Serialization Methods

readExternal

public void readExternal(ObjectInput arg0)
                  throws IOException,
                         ClassNotFoundException

Throws:

IOException

ClassNotFoundException

writeExternal

public void writeExternal(ObjectOutput arg0)
                   throws IOException

Throws:

IOException

Class us.nj.nwk.overlapping_analysis.PropertiesEditorView extends JFrame implements Serializable

Serialized Fields

model

Model model

cancel_button

JButton cancel_button

ok_button

JButton ok_button

apperance_tab

JPanel apperance_tab

auto_grid

JRadioButton auto_grid

buttonGroup1

ButtonGroup buttonGroup1

empty_color

JButton empty_color

empty_color_label

JLabel empty_color_label

export_tab

JPanel export_tab

general_tab

JPanel general_tab

grid_startpoint_panel

JPanel grid_startpoint_panel

grid_startpoint_x

JTextField grid_startpoint_x

grid_startpoint_y

JTextField grid_startpoint_y

grid_startpoint_z

JTextField grid_startpoint_z

jLabel1

JLabel jLabel1

jLabel2

JLabel jLabel2

jLabel3

JLabel jLabel3

manual_grid

JRadioButton manual_grid

overlap_color

JButton overlap_color

overlap_color_label

JLabel overlap_color_label

pane_holder

JPanel pane_holder

plain_radio

JRadioButton plain_radio

ratio_empty

JTextField ratio_empty

ratio_overlap

JTextField ratio_overlap

ratio_panel

JPanel ratio_panel

ratio_panel_empty

JLabel ratio_panel_empty

ratio_panel_ol

JLabel ratio_panel_ol

rendering_button_group

ButtonGroup rendering_button_group

rendering_label

JLabel rendering_label

show_empty_bins

JCheckBox show_empty_bins

show_cells

JCheckBox show_cells

show_empty_bins_label

JLabel show_empty_bins_label

slice_by_panel

JPanel slice_by_panel

statistic_panel

JPanel statistic_panel

slice_by_x

JRadioButton slice_by_x

density

JRadioButton density

bincount

JRadioButton bincount

slice_by_y

JRadioButton slice_by_y

slice_by_z

JRadioButton slice_by_z

slyce_by_button_group

ButtonGroup slyce_by_button_group

statistic_button_group

ButtonGroup statistic_button_group

tabbed_pane

JTabbedPane tabbed_pane

transparency_radio

JRadioButton transparency_radio

treshold_empty

JTextField treshold_empty

treshold_overlap

JTextField treshold_overlap

treshold_panel

JPanel treshold_panel

treshold_panel_empty1

JLabel treshold_panel_empty1

treshold_panel_ol1

JLabel treshold_panel_ol1

voxel_size_panel

JPanel voxel_size_panel

voxel_size_x

JTextField voxel_size_x

voxel_size_y

JTextField voxel_size_y

voxel_size_z

JTextField voxel_size_z

x_label

JLabel x_label

y_label

JLabel y_label

z_label

JLabel z_label

Class us.nj.nwk.overlapping_analysis.PropView extends JPanel implements Serializable

Serialized Fields

jtable

JTable jtable

treshold_field

JTextField treshold_field

string_editor

us.nj.nwk.overlapping_analysis.PropView.StringEditor string_editor

color_editor

us.nj.nwk.overlapping_analysis.PropView.ColorEditor color_editor

boolean_editor

us.nj.nwk.overlapping_analysis.PropView.BooleanEditor boolean_editor

scrollpane

JScrollPane scrollpane

table_model

us.nj.nwk.overlapping_analysis.PropView.OverlapPropertiesTableModel table_model

properties_scrollpane

JScrollPane properties_scrollpane

model

Model model

Class us.nj.nwk.overlapping_analysis.SwingView extends Frame implements Serializable

Serialized Fields

menuBar

MenuBar menuBar

file_menu

Menu file_menu

open_file_menu_item

MenuItem open_file_menu_item

exit_menu_item

MenuItem exit_menu_item

tools_menu

Menu tools_menu

move_view_menu_item

MenuItem move_view_menu_item

zoom_view_menu_item

MenuItem zoom_view_menu_item

rotate_view_menu_item

MenuItem rotate_view_menu_item

toolbar_view

ToolbarView toolbar_view

java3d_view

Java3DView java3d_view

model

Model model

Class us.nj.nwk.overlapping_analysis.ToolbarView extends JPanel implements Serializable

Serialized Fields

open_icon

ImageIcon open_icon

save_icon

ImageIcon save_icon

toolbar

JToolBar toolbar

open_button

JButton open_button

save_button

JButton save_button

properties_button

JButton properties_button

export_button

JButton export_button

zoom_factor

JTextField zoom_factor

java3d_toolbar_view

Java3DToolbar java3d_toolbar_view

java3d_handler

Java3DHandler java3d_handler

model

Model model

java3d_model

Java3DModel java3d_model

Class us.nj.nwk.overlapping_analysis.TreeView extends JPanel implements Serializable

Serialized Fields

tree_scrollpane

JScrollPane tree_scrollpane

tree

JTree tree

tree_selection_model

TreeSelectionModel tree_selection_model

root

DefaultMutableTreeNode root

tree_model

DefaultTreeModel tree_model

tree_popup_menu

JPopupMenu tree_popup_menu

neuron_icon

ImageIcon neuron_icon

overlap_icon

ImageIcon overlap_icon

model

Model model

morphology_tree_node_mapping

Hashtable<K,V> morphology_tree_node_mapping

Package us.nj.nwk.overlapping_analysis.netbeans

Class us.nj.nwk.overlapping_analysis.netbeans.LaunchAction extends CallableSystemAction implements Serializable

Serialization Methods

readExternal

public void readExternal(ObjectInput arg0)
                  throws IOException,
                         ClassNotFoundException

Throws:

IOException

ClassNotFoundException

writeExternal

public void writeExternal(ObjectOutput arg0)
                   throws IOException

Throws:

IOException