A C F G I J L M N P R S T U V W

A

addListeners(MorphologyList) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
addListeners(MorphologyData) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
addListeners(AffineWarpDataStructure) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
addListeners(AffineWarpPoint) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
addListeners(Morphology) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
addListeners(Cell) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
addListeners(Feature) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
addListeners(MorphMLHandler) - Method in class uk.ac.ed.morphml_viewer.TreeView
 
addListeners(MorphologyList) - Method in class uk.ac.ed.morphml_viewer.TreeView
 
addListeners(MorphologyData) - Method in class uk.ac.ed.morphml_viewer.TreeView
 
addModelListener(Model.ModelListener) - Method in class uk.ac.ed.morphml_viewer.Model
 
addSelectionListener(Model.SelectionListener) - Method in class uk.ac.ed.morphml_viewer.Model
 
asynchronous() - Method in class uk.ac.ed.morphml_viewer.netbeans.LaunchAction
 

C

canHide(Object) - Method in class uk.ac.ed.morphml_viewer.Model
 
canShow(Object) - Method in class uk.ac.ed.morphml_viewer.Model
 
cell_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 
Controller - Class in uk.ac.ed.morphml_viewer
The Controller has two nested classes, one which handles events in the AWT/Swing view, and a second which handles events in the Java3D view.
Controller(Model, View, int) - Constructor for class uk.ac.ed.morphml_viewer.Controller
Constructs a new Controller.

F

feature_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 

G

getCloneableTopComponent() - Method in class uk.ac.ed.morphml_viewer.NetBeansModule
 
getContainer() - Method in class uk.ac.ed.morphml_viewer.View
Returns the container
getDeselectedObject() - Method in class uk.ac.ed.morphml_viewer.Model.SelectionEvent
 
getHelpCtx() - Method in class uk.ac.ed.morphml_viewer.netbeans.LaunchAction
 
getHelpCtx() - Method in class uk.ac.ed.morphml_viewer.netbeans.MorphMLViewerLaunchActionAction
 
getIcon() - Method in class uk.ac.ed.morphml_viewer.NetBeansModuleView
 
getModel() - Method in class uk.ac.ed.morphml_viewer.View
Returns the model
getMorphMLHandler() - Method in class uk.ac.ed.morphml_viewer.Model
 
getMorphologyList() - Method in class uk.ac.ed.morphml_viewer.Model
 
getName() - Method in class uk.ac.ed.morphml_viewer.netbeans.LaunchAction
 
getName() - Method in class uk.ac.ed.morphml_viewer.netbeans.MorphMLViewerLaunchActionAction
 
getNewMorphologyList() - Method in class uk.ac.ed.morphml_viewer.Model.ModelEvent
 
getOldMorphologyList() - Method in class uk.ac.ed.morphml_viewer.Model.ModelEvent
 
getPersistenceType() - Method in class uk.ac.ed.morphml_viewer.NetBeansModuleView
 
getSelectedObject() - Method in class uk.ac.ed.morphml_viewer.Model
 
getSelectedObject() - Method in class uk.ac.ed.morphml_viewer.Model.SelectionEvent
 
getWarpPointsTable() - Method in class uk.ac.ed.morphml_viewer.PropertiesView
 

I

iconResource() - Method in class uk.ac.ed.morphml_viewer.netbeans.LaunchAction
 
iconResource() - Method in class uk.ac.ed.morphml_viewer.netbeans.MorphMLViewerLaunchActionAction
 
initListeners() - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
initListeners() - Method in class uk.ac.ed.morphml_viewer.TreeView
 
initPanel() - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
initScrollPane() - Method in class uk.ac.ed.morphml_viewer.TreeView
 
initTableListener() - Method in class uk.ac.ed.morphml_viewer.PropertiesController
 
initTree() - Method in class uk.ac.ed.morphml_viewer.TreeView
 
isSelected(Object) - Method in class uk.ac.ed.morphml_viewer.Model
 
isVisible(Object) - Method in class uk.ac.ed.morphml_viewer.Model
 

J

Java3DController - Class in uk.ac.ed.morphml_viewer
User: nix Date: Apr 22, 2004 Time: 2:35:51 PM To change this template use Options | File Templates.
Java3DController(Model, Java3DView) - Constructor for class uk.ac.ed.morphml_viewer.Java3DController
Constructs a new Java3DController
Java3DView - Class in uk.ac.ed.morphml_viewer
User: nix Date: Apr 22, 2004 Time: 2:35:41 PM To change this template use Options | File Templates.
Java3DView(Model) - Constructor for class uk.ac.ed.morphml_viewer.Java3DView
 

L

LaunchAction - Class in uk.ac.ed.morphml_viewer.netbeans
Action that can always be invoked and work procedurally.
LaunchAction() - Constructor for class uk.ac.ed.morphml_viewer.netbeans.LaunchAction
 

M

main(String[]) - Static method in class uk.ac.ed.morphml_viewer.StandAlone
 
Model - Class in uk.ac.ed.morphml_viewer
 
Model() - Constructor for class uk.ac.ed.morphml_viewer.Model
 
Model.ModelAdapter - Class in uk.ac.ed.morphml_viewer
 
Model.ModelAdapter() - Constructor for class uk.ac.ed.morphml_viewer.Model.ModelAdapter
 
Model.ModelEvent - Class in uk.ac.ed.morphml_viewer
 
Model.ModelEvent(Object) - Constructor for class uk.ac.ed.morphml_viewer.Model.ModelEvent
 
Model.ModelEvent(Object, MorphologyList, MorphologyList) - Constructor for class uk.ac.ed.morphml_viewer.Model.ModelEvent
 
Model.ModelListener - Interface in uk.ac.ed.morphml_viewer
 
Model.SelectionAdapter - Class in uk.ac.ed.morphml_viewer
 
Model.SelectionAdapter() - Constructor for class uk.ac.ed.morphml_viewer.Model.SelectionAdapter
 
Model.SelectionEvent - Class in uk.ac.ed.morphml_viewer
 
Model.SelectionEvent(Object, Object, Object) - Constructor for class uk.ac.ed.morphml_viewer.Model.SelectionEvent
 
Model.SelectionListener - Interface in uk.ac.ed.morphml_viewer
 
morphml_handler - Variable in class uk.ac.ed.morphml_viewer.Model
 
morphml_handler_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 
morphml_handler_listener - Variable in class uk.ac.ed.morphml_viewer.TreeView
 
MorphMLViewerLaunchActionAction - Class in uk.ac.ed.morphml_viewer.netbeans
Action that can always be invoked and work procedurally.
MorphMLViewerLaunchActionAction() - Constructor for class uk.ac.ed.morphml_viewer.netbeans.MorphMLViewerLaunchActionAction
 
morphology_data_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 
morphology_data_listener - Variable in class uk.ac.ed.morphml_viewer.TreeView
 
morphology_list - Variable in class uk.ac.ed.morphml_viewer.Model
 
morphology_list_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 
morphology_list_listener - Variable in class uk.ac.ed.morphml_viewer.TreeView
 
morphology_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 
morphologyListChanged(Model.ModelEvent) - Method in class uk.ac.ed.morphml_viewer.Model.ModelAdapter
 
morphologyListChanged(Model.ModelEvent) - Method in interface uk.ac.ed.morphml_viewer.Model.ModelListener
 

N

NETBEANS_MODULE_VIEW - Static variable in class uk.ac.ed.morphml_viewer.View
 
NetBeansModule - Class in uk.ac.ed.morphml_viewer
User: nix Date: Feb 24, 2004 Time: 2:50:31 PM To change this template use Options | File Templates.
NetBeansModule() - Constructor for class uk.ac.ed.morphml_viewer.NetBeansModule
Constructs a new StandAlone class.
NetBeansModuleController - Class in uk.ac.ed.morphml_viewer
User: nix Date: Apr 22, 2004 Time: 2:33:25 PM To change this template use Options | File Templates.
NetBeansModuleController(Model, NetBeansModuleView) - Constructor for class uk.ac.ed.morphml_viewer.NetBeansModuleController
Constructs a new SwingController
NetBeansModuleView - Class in uk.ac.ed.morphml_viewer
User: nix Date: Apr 22, 2004 Time: 2:33:08 PM To change this template use Options | File Templates.
NetBeansModuleView() - Constructor for class uk.ac.ed.morphml_viewer.NetBeansModuleView
 
NetBeansModuleView(Model) - Constructor for class uk.ac.ed.morphml_viewer.NetBeansModuleView
 

P

performAction() - Method in class uk.ac.ed.morphml_viewer.netbeans.LaunchAction
 
performAction() - Method in class uk.ac.ed.morphml_viewer.netbeans.MorphMLViewerLaunchActionAction
 
preferredID() - Method in class uk.ac.ed.morphml_viewer.NetBeansModuleView
 
properties_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 
PropertiesController - Class in uk.ac.ed.morphml_viewer
User: nix Date: 07-Oct-2004 Time: 12:12:23 To change this template use Options | File Templates.
PropertiesController(Model, PropertiesView) - Constructor for class uk.ac.ed.morphml_viewer.PropertiesController
 
PropertiesView - Class in uk.ac.ed.morphml_viewer
 
PropertiesView(Model) - Constructor for class uk.ac.ed.morphml_viewer.PropertiesView
 

R

removeListeners(MorphMLHandler) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
removeListeners(MorphologyList) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
removeListeners(MorphologyData) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
removeListeners(AffineWarpDataStructure) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
removeListeners(AffineWarpPoint) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
removeListeners(Morphology) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
removeListeners(Cell) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
removeListeners(Feature) - Method in class uk.ac.ed.morphml_viewer.Java3DView
 
removeListeners(MorphMLHandler) - Method in class uk.ac.ed.morphml_viewer.TreeView
 
removeListeners(MorphologyList) - Method in class uk.ac.ed.morphml_viewer.TreeView
 
removeListeners(MorphologyData) - Method in class uk.ac.ed.morphml_viewer.TreeView
 
removeModelListener(Model.ModelListener) - Method in class uk.ac.ed.morphml_viewer.Model
 
removeSelectionListener(Model.SelectionListener) - Method in class uk.ac.ed.morphml_viewer.Model
 

S

selectedObjectChanged(Model.SelectionEvent) - Method in class uk.ac.ed.morphml_viewer.Model.SelectionAdapter
 
selectedObjectChanged(Model.SelectionEvent) - Method in interface uk.ac.ed.morphml_viewer.Model.SelectionListener
 
selectFileToOpen() - Static method in class uk.ac.ed.morphml_viewer.View
Pops up a file chooser allowing the file to be opened to be selected.
setMorphologyList(MorphologyList) - Method in class uk.ac.ed.morphml_viewer.Model
 
setSelectedObject(Object) - Method in class uk.ac.ed.morphml_viewer.Model
 
StandAlone - Class in uk.ac.ed.morphml_viewer
 
StandAlone() - Constructor for class uk.ac.ed.morphml_viewer.StandAlone
 
STANDALONE_VIEW - Static variable in class uk.ac.ed.morphml_viewer.View
 
SwingController - Class in uk.ac.ed.morphml_viewer
User: nix Date: Apr 22, 2004 Time: 2:33:15 PM To change this template use Options | File Templates.
SwingController(Model, SwingView) - Constructor for class uk.ac.ed.morphml_viewer.SwingController
Constructs a new SwingController
SwingView - Class in uk.ac.ed.morphml_viewer
User: nix Date: Apr 22, 2004 Time: 2:32:53 PM To change this template use Options | File Templates.
SwingView(Model) - Constructor for class uk.ac.ed.morphml_viewer.SwingView
Constructs a new SwingView

T

TreeController - Class in uk.ac.ed.morphml_viewer
 
TreeController(Model, TreeView) - Constructor for class uk.ac.ed.morphml_viewer.TreeController
 
TreeView - Class in uk.ac.ed.morphml_viewer
 
TreeView(Model) - Constructor for class uk.ac.ed.morphml_viewer.TreeView
 

U

uk.ac.ed.morphml_viewer - package uk.ac.ed.morphml_viewer
 
uk.ac.ed.morphml_viewer.netbeans - package uk.ac.ed.morphml_viewer.netbeans
 

V

View - Class in uk.ac.ed.morphml_viewer
The View object contains two nested classes, one which handles the AWT/Swing components of the view and a second which handle the Java3D components of the view.
View(Model, int) - Constructor for class uk.ac.ed.morphml_viewer.View
Constructs a new View

W

warp_point_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 
warp_points_listener - Variable in class uk.ac.ed.morphml_viewer.Java3DView
 

A C F G I J L M N P R S T U V W