Uses of Class
uk.ac.ed.morphml_handler.Morphology

Packages that use Morphology

uk.ac.ed.morphml_handler
uk.ac.ed.morphml_handler.accustage
uk.ac.ed.morphml_handler.neurolucida

Uses of Morphology in uk.ac.ed.morphml_handler

Fields in uk.ac.ed.morphml_handler declared as Morphology

protected Morphology	Feature.morphology
protected Morphology	Cell.morphology
protected Morphology	MorphologyData.MorphologyDataEvent.new_morphology
protected Morphology	MorphologyData.MorphologyDataEvent.old_morphology
protected Morphology	MorphologyData.raw_data_file
protected Morphology	MorphologyData.warped_data_file

Methods in uk.ac.ed.morphml_handler that return Morphology

Morphology	Feature.getMorphology()
Morphology	Cell.getMorphology()
Morphology	MorphologyData.MorphologyDataEvent.getNewMorphology()
Morphology	MorphologyData.MorphologyDataEvent.getOldMorphology()
Morphology	MorphologyData.getRawMorphology()
Morphology	MorphologyData.getWarpedMorphology()
Morphology	MorphMLHandler.newMorphology()
static Morphology	MorphMLHandler.openAccustageURI(URI uri)
static Morphology	MorphMLHandler.openMorphologyURI(URI uri)
static Morphology	MorphMLHandler.openNeurolucidaURI(URI uri)

Methods in uk.ac.ed.morphml_handler with parameters of type Morphology

void	MorphMLTree.addMorphology(Morphology morphology)
void	MorphMLJava3DPanel.addMorphology(Morphology morphology)
void	MorphMLJava3DPanel.addMorphology(Morphology morphology, int fill_type)
protected void	MorphMLTree.addMorphology(Morphology morphology, MorphMLTree.MorphMLTreeNode parent_tree_node)
protected void	MorphologyData.fireRawMorphologyChanged(Morphology new_morphology, Morphology old_morphology)
protected void	MorphologyData.fireWarpedMorphologyChanged(Morphology new_morphology, Morphology old_morphology)
void	MorphMLTree.removeMorphology(Morphology morphology)
void	MorphMLJava3DPanel.removeMorphology(Morphology morphology)
javax.media.j3d.BranchGroup	MorphMLJava3DPanel.renderMorphology(Morphology morphology, int fill_type)
static void	MorphMLHandler.saveMorphology(Morphology morphology)
void	Feature.setMorphology(Morphology morphology)
void	Cell.setMorphology(Morphology morphology)
protected void	MorphMLPropertiesPanel.setMorplMLEntity(Morphology morphology)
void	MorphologyData.setRawMorphology(Morphology morphology)
void	MorphologyData.setWarpedMorphology(Morphology morphology)
void	MorphMLJava3DPanel.transformMorphology(Morphology morphology, javax.vecmath.Matrix4d matrix)

Constructors in uk.ac.ed.morphml_handler with parameters of type Morphology

MorphologyData.MorphologyDataEvent(Object source, Morphology new_morphology, Morphology old_morphology)

Uses of Morphology in uk.ac.ed.morphml_handler.accustage

Methods in uk.ac.ed.morphml_handler.accustage that return Morphology

Morphology

AccustageHandler.readStream(MorphMLHandler morphml_Handler, InputStream input_stream)

Uses of Morphology in uk.ac.ed.morphml_handler.neurolucida

Methods in uk.ac.ed.morphml_handler.neurolucida that return Morphology

Morphology

NeurolucidaHandler.readStream(MorphMLHandler morphml_Handler, InputStream input_stream)

Methods in uk.ac.ed.morphml_handler.neurolucida with parameters of type Morphology

protected void	NeurolucidaHandler.addBranch(uk.ac.ed.morphml_handler.neurolucida.NeurolucidaObject tree, MorphMLHandler morphml_handler, Morphology morphology, Cell cell, org.virtualratbrain.namespace.Segment parent_segment)
protected void	NeurolucidaHandler.addBranch(uk.ac.ed.morphml_handler.neurolucida.NeurolucidaObject tree, MorphMLHandler morphml_handler, Morphology morphology, Cell cell, org.virtualratbrain.namespace.Segment parent_segment, String group_name)
protected void	NeurolucidaHandler.addFreePoints(uk.ac.ed.morphml_handler.neurolucida.NeurolucidaObject marker, MorphMLHandler morphml_handler, Morphology morphology, org.virtualratbrain.namespace.FreePoints points)
protected void	NeurolucidaHandler.addPolygon(uk.ac.ed.morphml_handler.neurolucida.NeurolucidaObject contour, MorphMLHandler morphml_handler, Morphology morphology, org.virtualratbrain.namespace.Polygon polygon)
protected void	NeurolucidaHandler.addProperties(uk.ac.ed.morphml_handler.neurolucida.NeurolucidaObject object, MorphMLHandler morphml_handler, Morphology morphology, Properties morphml_properties)