uk.ac.ed.paxinos3d
Class Model

java.lang.Object
  uk.ac.ed.paxinos3d.Model

public class Model
extends Object

User: nix Date: 29-Jun-2005 Time: 19:04:22 To change this template use Options | File Templates.

Nested Class Summary

static class	Model.ModelAdapter
static class	Model.ModelEvent
static interface	Model.ModelListener
static class	Model.TaskProgress
class	Model.TaskStatus
static class	Model.TaskType

Field Summary

protected File[]	atlas_files
protected List<Model.ModelListener>	model_listeners
protected Morphology	morphology
protected File	paxino_structure_file
protected boolean	reorientate_atlas_on_select
protected Object	selected
protected Model.TaskStatus	task_status

Constructor Summary

Model()

Method Summary

void	addModelListener(Model.ModelListener listener)
protected void	buildManifolds(Morphology morphology)
protected void	fireAtlasFilesChanged(File[] old_files, File[] files)
protected void	fireMorphologyChanged(Morphology old_morphology, Morphology morphology)
protected void	firePaxinoStructureFileChanged(File old_file, File file)
protected void	fireSelectedChanged(Object deselected, Object selected)
protected void	fireStatusChanged()
File[]	getAtlasFiles()
protected javax.vecmath.Point3d	getCentreOfMass(Feature feature)
Morphology	getMorphology()
File	getPaxinoStructureFile()
boolean	getReorientateAtlasOnSelect()
Object	getSelected()
Model.TaskStatus	getTaskStatus()
Morphology	loadAtlas()
Morphology	reloadAtlas()
void	removeModelListener(Model.ModelListener listener)
void	setAtlasDirectory(File atlas_directory)
void	setAtlasFiles(File[] atlas_files)
void	setMorphology(Morphology morphology)
void	setPaxinoStructureFile(File file)
void	setReorientateAtlasOnSelect(boolean reorientate_atlas_on_select)
void	setSelected(Object selected)
void	showCoCoMacAfferentConnectivity()
void	showCoCoMacBrainSiteInfo()
void	showCoCoMacEfferentConnectivity()
void	showCoCoMacMapInfo()
void	showCoCoMacMapping()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

paxino_structure_file

protected File paxino_structure_file

atlas_files

protected File[] atlas_files

morphology

protected Morphology morphology

selected

protected Object selected

task_status

protected Model.TaskStatus task_status

reorientate_atlas_on_select

protected boolean reorientate_atlas_on_select

model_listeners

protected List<Model.ModelListener> model_listeners

Constructor Detail

Model

public Model()

Method Detail

getPaxinoStructureFile

public File getPaxinoStructureFile()

setPaxinoStructureFile

public void setPaxinoStructureFile(File file)

getAtlasFiles

public File[] getAtlasFiles()

setAtlasFiles

public void setAtlasFiles(File[] atlas_files)

setAtlasDirectory

public void setAtlasDirectory(File atlas_directory)

getReorientateAtlasOnSelect

public boolean getReorientateAtlasOnSelect()

setReorientateAtlasOnSelect

public void setReorientateAtlasOnSelect(boolean reorientate_atlas_on_select)

getMorphology

public Morphology getMorphology()

setMorphology

public void setMorphology(Morphology morphology)

getSelected

public Object getSelected()

setSelected

public void setSelected(Object selected)

getTaskStatus

public Model.TaskStatus getTaskStatus()

addModelListener

public void addModelListener(Model.ModelListener listener)

removeModelListener

public void removeModelListener(Model.ModelListener listener)

loadAtlas

public Morphology loadAtlas()

reloadAtlas

public Morphology reloadAtlas()

buildManifolds

protected void buildManifolds(Morphology morphology)

getCentreOfMass

protected javax.vecmath.Point3d getCentreOfMass(Feature feature)

showCoCoMacMapInfo

public void showCoCoMacMapInfo()

showCoCoMacBrainSiteInfo

public void showCoCoMacBrainSiteInfo()

showCoCoMacMapping

public void showCoCoMacMapping()

showCoCoMacAfferentConnectivity

public void showCoCoMacAfferentConnectivity()

showCoCoMacEfferentConnectivity

public void showCoCoMacEfferentConnectivity()

fireStatusChanged

protected void fireStatusChanged()

firePaxinoStructureFileChanged

protected void firePaxinoStructureFileChanged(File old_file,
                                              File file)

fireAtlasFilesChanged

protected void fireAtlasFilesChanged(File[] old_files,
                                     File[] files)

fireMorphologyChanged

protected void fireMorphologyChanged(Morphology old_morphology,
                                     Morphology morphology)

fireSelectedChanged

protected void fireSelectedChanged(Object deselected,
                                   Object selected)